Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 AL138688.1-201ENST00000624851 1594 ntBASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 AC142381.2-201ENST00000566120 298 ntBASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 AL160286.2-201ENST00000567150 934 ntBASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 TSPY26P-202ENST00000565928 3884 ntBASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 PHGDH-209ENST00000641074 1780 ntBASIC12.79□□□□□ -0.36
CHTOPQ9Y3Y2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 DOC2GP-204ENST00000639052 2548 ntBASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CHTOPQ9Y3Y2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHTOPQ9Y3Y2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHTOPQ9Y3Y2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHTOPQ9Y3Y2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHTOPQ9Y3Y2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC12.77□□□□□ -0.37
CHTOPQ9Y3Y2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC12.77□□□□□ -0.37
CHTOPQ9Y3Y2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC12.77□□□□□ -0.37
CHTOPQ9Y3Y2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms