Protein–RNA interactions for Protein: Q9Y2V3

RAX, Retinal homeobox protein Rx, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAXQ9Y2V3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 RN7SL692P-201ENST00000464677 288 ntBASIC16.32■□□□□ 0.2
RAXQ9Y2V3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 FAM86C2P-203ENST00000528684 1004 ntBASIC16.32■□□□□ 0.2
RAXQ9Y2V3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.32■□□□□ 0.2
RAXQ9Y2V3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 AC140878.1-201ENST00000565277 250 ntBASIC16.31■□□□□ 0.2
RAXQ9Y2V3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 AL662799.1-202ENST00000614205 422 ntBASIC16.31■□□□□ 0.2
RAXQ9Y2V3 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 MIR6799-201ENST00000620297 69 ntBASIC16.31■□□□□ 0.2
RAXQ9Y2V3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAXQ9Y2V3 AL158211.5-201ENST00000623583 2518 ntBASIC16.3■□□□□ 0.2
RAXQ9Y2V3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 COX5BP8-201ENST00000416911 349 ntBASIC16.3■□□□□ 0.2
RAXQ9Y2V3 ARSEP1-201ENST00000420443 635 ntBASIC16.3■□□□□ 0.2
RAXQ9Y2V3 FAM185BP-201ENST00000443595 716 ntBASIC16.3■□□□□ 0.2
RAXQ9Y2V3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 AC079140.1-201ENST00000508039 487 ntBASIC16.3■□□□□ 0.2
RAXQ9Y2V3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.3■□□□□ 0.2
RAXQ9Y2V3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAXQ9Y2V3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.29■□□□□ 0.2
RAXQ9Y2V3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.29■□□□□ 0.2
RAXQ9Y2V3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAXQ9Y2V3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAXQ9Y2V3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAXQ9Y2V3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAXQ9Y2V3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms