Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.18■□□□□ 0.02
COMMD9Q9P000 AC233263.1-201ENST00000578059 224 ntBASIC15.18■□□□□ 0.02
COMMD9Q9P000 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
COMMD9Q9P000 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
COMMD9Q9P000 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.18■□□□□ 0.02
COMMD9Q9P000 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 AL391005.1-201ENST00000623953 2435 ntBASIC15.18■□□□□ 0.02
COMMD9Q9P000 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.18■□□□□ 0.02
COMMD9Q9P000 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COMMD9Q9P000 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.18■□□□□ 0.02
COMMD9Q9P000 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.18■□□□□ 0.02
COMMD9Q9P000 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD9Q9P000 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 AC004980.1-204ENST00000429707 299 ntBASIC15.17■□□□□ 0.02
COMMD9Q9P000 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 AL353708.3-201ENST00000610272 989 ntBASIC15.17■□□□□ 0.02
COMMD9Q9P000 AC110285.5-201ENST00000611501 352 ntBASIC15.17■□□□□ 0.02
COMMD9Q9P000 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 PCDHB19P-201ENST00000570871 2371 ntBASIC15.17■□□□□ 0.02
COMMD9Q9P000 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.17■□□□□ 0.02
COMMD9Q9P000 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD9Q9P000 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COMMD9Q9P000 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
COMMD9Q9P000 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD9Q9P000 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD9Q9P000 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD9Q9P000 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
COMMD9Q9P000 MYLKP1-201ENST00000509077 1580 ntBASIC15.16■□□□□ 0.02
COMMD9Q9P000 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD9Q9P000 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD9Q9P000 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD9Q9P000 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD9Q9P000 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms