Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.76■□□□□ 0.59
TLR9Q9NR96 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR9Q9NR96 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.76■□□□□ 0.59
TLR9Q9NR96 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TLR9Q9NR96 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR9Q9NR96 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.76■□□□□ 0.59
TLR9Q9NR96 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR9Q9NR96 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TLR9Q9NR96 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.75■□□□□ 0.59
TLR9Q9NR96 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 AC148477.5-201ENST00000625164 1645 ntBASIC18.75■□□□□ 0.59
TLR9Q9NR96 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 AC132938.5-201ENST00000624980 1813 ntBASIC18.75■□□□□ 0.59
TLR9Q9NR96 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.75■□□□□ 0.59
TLR9Q9NR96 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.75■□□□□ 0.59
TLR9Q9NR96 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TLR9Q9NR96 RPS15P9-201ENST00000494093 319 ntBASIC18.75■□□□□ 0.59
TLR9Q9NR96 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.75■□□□□ 0.59
TLR9Q9NR96 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TLR9Q9NR96 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.75■□□□□ 0.59
TLR9Q9NR96 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 NEFHP1-201ENST00000412845 2629 ntBASIC18.75■□□□□ 0.59
TLR9Q9NR96 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TLR9Q9NR96 AC120498.9-201ENST00000339021 3867 ntBASIC18.75■□□□□ 0.59
TLR9Q9NR96 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.75■□□□□ 0.59
TLR9Q9NR96 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
TLR9Q9NR96 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR9Q9NR96 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 AL049757.1-201ENST00000616842 1596 ntBASIC18.74■□□□□ 0.59
TLR9Q9NR96 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 KLF4P1-201ENST00000412782 1185 ntBASIC18.74■□□□□ 0.59
TLR9Q9NR96 CNN2P11-201ENST00000429351 262 ntBASIC18.74■□□□□ 0.59
TLR9Q9NR96 MKNK2P1-201ENST00000437526 628 ntBASIC18.74■□□□□ 0.59
TLR9Q9NR96 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 DUTP2-201ENST00000519164 463 ntBASIC18.74■□□□□ 0.59
TLR9Q9NR96 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 AC239800.4-201ENST00000603712 296 ntBASIC18.74■□□□□ 0.59
TLR9Q9NR96 AL513190.1-201ENST00000621254 727 ntBASIC18.74■□□□□ 0.59
TLR9Q9NR96 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
TLR9Q9NR96 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TLR9Q9NR96 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 PHGDH-209ENST00000641074 1780 ntBASIC18.73■□□□□ 0.59
TLR9Q9NR96 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 GPR89P-201ENST00000407924 1495 ntBASIC18.73■□□□□ 0.59
TLR9Q9NR96 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 AC093503.3-201ENST00000624917 2352 ntBASIC18.73■□□□□ 0.59
TLR9Q9NR96 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 AL078644.1-201ENST00000609881 752 ntBASIC18.73■□□□□ 0.59
TLR9Q9NR96 AC004790.2-201ENST00000623588 572 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms