Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 MINOS1P3-201ENST00000457048 203 ntBASIC18.78■□□□□ 0.6
CYLDQ9NQC7 AC091304.2-201ENST00000564639 760 ntBASIC18.78■□□□□ 0.6
CYLDQ9NQC7 BNIP3P18-201ENST00000593976 575 ntBASIC18.78■□□□□ 0.6
CYLDQ9NQC7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 AC139713.2-201ENST00000641328 2723 ntBASIC18.78■□□□□ 0.6
CYLDQ9NQC7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYLDQ9NQC7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 POM121L3P-201ENST00000419331 1163 ntBASIC18.77■□□□□ 0.6
CYLDQ9NQC7 TPM4P1-201ENST00000436100 807 ntBASIC18.77■□□□□ 0.6
CYLDQ9NQC7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 RN7SL510P-201ENST00000581311 263 ntBASIC18.77■□□□□ 0.6
CYLDQ9NQC7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 AL121894.2-201ENST00000602977 491 ntBASIC18.77■□□□□ 0.6
CYLDQ9NQC7 IFNL4P1-201ENST00000607083 540 ntBASIC18.77■□□□□ 0.6
CYLDQ9NQC7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.77■□□□□ 0.6
CYLDQ9NQC7 FZD10-202ENST00000539839 3282 ntBASIC18.77■□□□□ 0.6
CYLDQ9NQC7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CYLDQ9NQC7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CYLDQ9NQC7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CYLDQ9NQC7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CYLDQ9NQC7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.77■□□□□ 0.59
CYLDQ9NQC7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CYLDQ9NQC7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
CYLDQ9NQC7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CYLDQ9NQC7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms