Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21■□□□□ 0.95
RTN4Q9NQC3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTN4Q9NQC3 AL137784.2-201ENST00000607332 1000 ntBASIC21■□□□□ 0.95
RTN4Q9NQC3 MYC-209ENST00000641252 345 ntBASIC21■□□□□ 0.95
RTN4Q9NQC3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTN4Q9NQC3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21■□□□□ 0.95
RTN4Q9NQC3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC21■□□□□ 0.95
RTN4Q9NQC3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC21■□□□□ 0.95
RTN4Q9NQC3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTN4Q9NQC3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21■□□□□ 0.95
RTN4Q9NQC3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTN4Q9NQC3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 SLC25A6P5-201ENST00000435663 894 ntBASIC20.99■□□□□ 0.95
RTN4Q9NQC3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.99■□□□□ 0.95
RTN4Q9NQC3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.98■□□□□ 0.95
RTN4Q9NQC3 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 ADAM3B-201ENST00000569937 840 ntBASIC20.98■□□□□ 0.95
RTN4Q9NQC3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 AC120498.8-201ENST00000614275 531 ntBASIC20.98■□□□□ 0.95
RTN4Q9NQC3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 AC026691.1-201ENST00000602502 2017 ntBASIC20.98■□□□□ 0.95
RTN4Q9NQC3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 AC024909.3-201ENST00000611513 2257 ntBASIC20.98■□□□□ 0.95
RTN4Q9NQC3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 LYSMD4-203ENST00000378904 2122 ntBASIC20.98■□□□□ 0.95
RTN4Q9NQC3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4Q9NQC3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms