Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 AC018445.3-201ENST00000624177 1945 ntBASIC16.34■□□□□ 0.21
CHD8Q9HCK8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHD8Q9HCK8 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHD8Q9HCK8 AC104794.3-201ENST00000566840 1248 ntBASIC16.33■□□□□ 0.21
CHD8Q9HCK8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHD8Q9HCK8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.33■□□□□ 0.21
CHD8Q9HCK8 MIR6869-201ENST00000619434 62 ntBASIC16.33■□□□□ 0.21
CHD8Q9HCK8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CHD8Q9HCK8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.33■□□□□ 0.21
CHD8Q9HCK8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHD8Q9HCK8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CHD8Q9HCK8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 SPDYE7P-202ENST00000420373 878 ntBASIC16.33■□□□□ 0.2
CHD8Q9HCK8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 AL139099.5-201ENST00000635274 300 ntBASIC16.33■□□□□ 0.2
CHD8Q9HCK8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 AC009102.3-201ENST00000623118 1491 ntBASIC16.33■□□□□ 0.2
CHD8Q9HCK8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 PTCHD3P3-201ENST00000403073 906 ntBASIC16.33■□□□□ 0.2
CHD8Q9HCK8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.33■□□□□ 0.2
CHD8Q9HCK8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.33■□□□□ 0.2
CHD8Q9HCK8 AL138828.2-201ENST00000615812 383 ntBASIC16.33■□□□□ 0.2
CHD8Q9HCK8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 API5-211ENST00000534695 560 ntTSL 5 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 TCF3P1-201ENST00000423021 1937 ntBASIC16.32■□□□□ 0.2
CHD8Q9HCK8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 DFFBP1-201ENST00000433250 979 ntBASIC16.32■□□□□ 0.2
CHD8Q9HCK8 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.32■□□□□ 0.2
CHD8Q9HCK8 AL109936.8-201ENST00000641772 604 ntBASIC16.32■□□□□ 0.2
CHD8Q9HCK8 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.31■□□□□ 0.2
CHD8Q9HCK8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 AC022210.1-201ENST00000449856 793 ntBASIC16.31■□□□□ 0.2
CHD8Q9HCK8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.31■□□□□ 0.2
CHD8Q9HCK8 AL499627.1-201ENST00000569373 2188 ntBASIC16.31■□□□□ 0.2
CHD8Q9HCK8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms