Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 Z92544.3-201ENST00000624747 417 ntBASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE28Q9HCC9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 AC109462.3-201ENST00000573934 613 ntBASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 AC019129.2-201ENST00000609837 1235 ntBASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 AL035252.4-201ENST00000624174 288 ntBASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 AC063926.2-201ENST00000623766 1308 ntBASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 AC093010.1-201ENST00000473625 1624 ntBASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE28Q9HCC9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 AC093214.1-201ENST00000511688 1107 ntBASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 AC015911.4-201ENST00000588022 1070 ntBASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE28Q9HCC9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZFYVE28Q9HCC9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZFYVE28Q9HCC9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 PI4KAP1-204ENST00000612579 1703 ntBASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 LINC00982-205ENST00000420957 435 ntBASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 INGX-202ENST00000489074 768 ntBASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 AC112191.1-201ENST00000523689 701 ntBASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 STK25P1-201ENST00000585406 838 ntBASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE28Q9HCC9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 AC015922.1-201ENST00000421102 1152 ntBASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms