Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CBX8Q9HC52 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CBX8Q9HC52 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CBX8Q9HC52 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CBX8Q9HC52 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CBX8Q9HC52 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CBX8Q9HC52 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CBX8Q9HC52 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CBX8Q9HC52 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.83■□□□□ 0.77
CBX8Q9HC52 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.83■□□□□ 0.77
CBX8Q9HC52 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CBX8Q9HC52 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.83■□□□□ 0.77
CBX8Q9HC52 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.83■□□□□ 0.77
CBX8Q9HC52 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.83■□□□□ 0.77
CBX8Q9HC52 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.83■□□□□ 0.77
CBX8Q9HC52 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CBX8Q9HC52 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 AC116353.5-201ENST00000638148 1699 ntBASIC19.83■□□□□ 0.76
CBX8Q9HC52 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 AC005915.1-201ENST00000624912 2018 ntBASIC19.83■□□□□ 0.76
CBX8Q9HC52 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CBX8Q9HC52 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.83■□□□□ 0.76
CBX8Q9HC52 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX8Q9HC52 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CBX8Q9HC52 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 LYSMD4-203ENST00000378904 2122 ntBASIC19.82■□□□□ 0.76
CBX8Q9HC52 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.82■□□□□ 0.76
CBX8Q9HC52 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.82■□□□□ 0.76
CBX8Q9HC52 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX8Q9HC52 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 ABHD17AP1-201ENST00000358206 933 ntBASIC19.81■□□□□ 0.76
CBX8Q9HC52 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.81■□□□□ 0.76
CBX8Q9HC52 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 AC016396.2-201ENST00000562575 1417 ntBASIC19.81■□□□□ 0.76
CBX8Q9HC52 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 CICP6-201ENST00000457191 2729 ntBASIC19.81■□□□□ 0.76
CBX8Q9HC52 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.81■□□□□ 0.76
CBX8Q9HC52 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX8Q9HC52 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms