Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC098831.1-202ENST00000438821 336 ntBASIC20.65■□□□□ 0.9
SH2D4AQ9H788 PRYP5-201ENST00000451909 266 ntBASIC20.65■□□□□ 0.9
SH2D4AQ9H788 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 GPALPP1-207ENST00000611650 899 ntBASIC20.65■□□□□ 0.9
SH2D4AQ9H788 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.65■□□□□ 0.9
SH2D4AQ9H788 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH2D4AQ9H788 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH2D4AQ9H788 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH2D4AQ9H788 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH2D4AQ9H788 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.64■□□□□ 0.9
SH2D4AQ9H788 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.64■□□□□ 0.9
SH2D4AQ9H788 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 AC012640.2-201ENST00000561606 901 ntBASIC20.64■□□□□ 0.89
SH2D4AQ9H788 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 AC006557.2-201ENST00000592985 1240 ntBASIC20.64■□□□□ 0.89
SH2D4AQ9H788 TERC-201ENST00000602385 541 ntBASIC20.64■□□□□ 0.89
SH2D4AQ9H788 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4AQ9H788 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 AL353593.2-201ENST00000602529 1483 ntBASIC20.63■□□□□ 0.89
SH2D4AQ9H788 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH2D4AQ9H788 AC104109.2-201ENST00000602919 1418 ntBASIC20.62■□□□□ 0.89
SH2D4AQ9H788 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 PMS2P7-201ENST00000506558 1336 ntBASIC20.62■□□□□ 0.89
SH2D4AQ9H788 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 AL020989.1-201ENST00000422979 469 ntBASIC20.62■□□□□ 0.89
SH2D4AQ9H788 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 DDX43P3-201ENST00000441064 443 ntBASIC20.62■□□□□ 0.89
SH2D4AQ9H788 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 AC006538.3-201ENST00000612495 578 ntBASIC20.62■□□□□ 0.89
SH2D4AQ9H788 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 AC135776.1-201ENST00000319817 2481 ntBASIC20.62■□□□□ 0.89
SH2D4AQ9H788 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH2D4AQ9H788 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms