Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.13■□□□□ 0.65
NXF3Q9H4D5 BX276092.7-203ENST00000637198 1536 ntBASIC19.13■□□□□ 0.65
NXF3Q9H4D5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.13■□□□□ 0.65
NXF3Q9H4D5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 MIR574-201ENST00000385209 96 ntBASIC19.12■□□□□ 0.65
NXF3Q9H4D5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.12■□□□□ 0.65
NXF3Q9H4D5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NXF3Q9H4D5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 AP002414.3-201ENST00000589352 1468 ntBASIC19.11■□□□□ 0.65
NXF3Q9H4D5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 AC098831.1-202ENST00000438821 336 ntBASIC19.11■□□□□ 0.65
NXF3Q9H4D5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 IGHV3-22-201ENST00000520721 359 ntBASIC19.11■□□□□ 0.65
NXF3Q9H4D5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 AC106730.1-201ENST00000566722 1090 ntBASIC19.11■□□□□ 0.65
NXF3Q9H4D5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NXF3Q9H4D5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 KLF4P1-201ENST00000412782 1185 ntBASIC19.1■□□□□ 0.65
NXF3Q9H4D5 LAGE3P1-201ENST00000425356 484 ntBASIC19.1■□□□□ 0.65
NXF3Q9H4D5 PMS2P1-201ENST00000431037 1228 ntBASIC19.1■□□□□ 0.65
NXF3Q9H4D5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms