Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS11Q9H270 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VPS11Q9H270 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VPS11Q9H270 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VPS11Q9H270 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS11Q9H270 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 TSPY14P-201ENST00000303979 915 ntBASIC17.88■□□□□ 0.45
VPS11Q9H270 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
VPS11Q9H270 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
VPS11Q9H270 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS11Q9H270 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 SNORA78-201ENST00000459373 127 ntBASIC17.88■□□□□ 0.45
VPS11Q9H270 AL355075.4-201ENST00000554988 638 ntBASIC17.88■□□□□ 0.45
VPS11Q9H270 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS11Q9H270 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
VPS11Q9H270 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS11Q9H270 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VPS11Q9H270 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
VPS11Q9H270 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 LINC00304-203ENST00000565008 1864 ntBASIC17.88■□□□□ 0.45
VPS11Q9H270 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS11Q9H270 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS11Q9H270 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS11Q9H270 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS11Q9H270 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS11Q9H270 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS11Q9H270 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS11Q9H270 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS11Q9H270 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
VPS11Q9H270 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 EGLN1P1-201ENST00000531623 762 ntBASIC17.87■□□□□ 0.45
VPS11Q9H270 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS11Q9H270 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 AC022898.2-201ENST00000616822 1312 ntBASIC17.87■□□□□ 0.45
VPS11Q9H270 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
VPS11Q9H270 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
VPS11Q9H270 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VPS11Q9H270 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
VPS11Q9H270 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS11Q9H270 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS11Q9H270 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS11Q9H270 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS11Q9H270 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS11Q9H270 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VPS11Q9H270 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS11Q9H270 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 AC128688.1-201ENST00000487626 519 ntBASIC17.86■□□□□ 0.45
VPS11Q9H270 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms