Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 AC022898.2-201ENST00000616822 1312 ntBASIC20.62■□□□□ 0.89
SLF1Q9BQI6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 RPS2P28-201ENST00000314255 741 ntBASIC20.62■□□□□ 0.89
SLF1Q9BQI6 PMS2P1-201ENST00000431037 1228 ntBASIC20.62■□□□□ 0.89
SLF1Q9BQI6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 AP000867.4-201ENST00000641616 219 ntBASIC20.62■□□□□ 0.89
SLF1Q9BQI6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 AC010460.3-201ENST00000511359 1579 ntBASIC20.62■□□□□ 0.89
SLF1Q9BQI6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 MIR574-201ENST00000385209 96 ntBASIC20.61■□□□□ 0.89
SLF1Q9BQI6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 RPS2P1-201ENST00000434010 821 ntBASIC20.61■□□□□ 0.89
SLF1Q9BQI6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SLF1Q9BQI6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 AC138932.1-201ENST00000534164 6830 ntBASIC20.6■□□□□ 0.89
SLF1Q9BQI6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 NKAPP1-205ENST00000585790 367 ntBASIC20.6■□□□□ 0.89
SLF1Q9BQI6 AC025062.2-201ENST00000605477 670 ntBASIC20.6■□□□□ 0.89
SLF1Q9BQI6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 AC116407.3-201ENST00000623905 1129 ntBASIC20.6■□□□□ 0.89
SLF1Q9BQI6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SLF1Q9BQI6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 AC122714.2-201ENST00000502787 707 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms