Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.2■□□□□ 0.82
PTPN18Q99952 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
PTPN18Q99952 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPN18Q99952 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN18Q99952 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN18Q99952 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN18Q99952 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PTPN18Q99952 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN18Q99952 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN18Q99952 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN18Q99952 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN18Q99952 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN18Q99952 AC009336.1-201ENST00000608941 1553 ntBASIC20.2■□□□□ 0.82
PTPN18Q99952 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN18Q99952 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPN18Q99952 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN18Q99952 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPN18Q99952 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN18Q99952 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN18Q99952 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN18Q99952 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN18Q99952 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN18Q99952 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.19■□□□□ 0.82
PTPN18Q99952 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PTPN18Q99952 AL627223.1-201ENST00000416693 442 ntBASIC20.19■□□□□ 0.82
PTPN18Q99952 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PTPN18Q99952 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN18Q99952 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PTPN18Q99952 AC093214.1-201ENST00000511688 1107 ntBASIC20.19■□□□□ 0.82
PTPN18Q99952 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN18Q99952 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN18Q99952 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.19■□□□□ 0.82
PTPN18Q99952 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.19■□□□□ 0.82
PTPN18Q99952 AC009093.7-201ENST00000623853 1223 ntBASIC20.19■□□□□ 0.82
PTPN18Q99952 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN18Q99952 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.19■□□□□ 0.82
PTPN18Q99952 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PTPN18Q99952 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN18Q99952 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.19■□□□□ 0.82
PTPN18Q99952 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN18Q99952 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PTPN18Q99952 AC100803.2-201ENST00000562459 1963 ntBASIC20.19■□□□□ 0.82
PTPN18Q99952 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN18Q99952 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.19■□□□□ 0.82
PTPN18Q99952 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
PTPN18Q99952 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN18Q99952 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN18Q99952 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN18Q99952 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PTPN18Q99952 MIR661-201ENST00000384842 89 ntBASIC20.18■□□□□ 0.82
PTPN18Q99952 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.18■□□□□ 0.82
PTPN18Q99952 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.18■□□□□ 0.82
PTPN18Q99952 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PTPN18Q99952 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.18■□□□□ 0.82
PTPN18Q99952 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 AC063926.2-201ENST00000623766 1308 ntBASIC20.18■□□□□ 0.82
PTPN18Q99952 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPN18Q99952 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PTPN18Q99952 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPN18Q99952 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PTPN18Q99952 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN18Q99952 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN18Q99952 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN18Q99952 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN18Q99952 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN18Q99952 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN18Q99952 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN18Q99952 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPN18Q99952 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.17■□□□□ 0.82
PTPN18Q99952 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN18Q99952 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PTPN18Q99952 ACTL9-202ENST00000612068 1252 ntBASIC20.17■□□□□ 0.82
PTPN18Q99952 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN18Q99952 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN18Q99952 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN18Q99952 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN18Q99952 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTPN18Q99952 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN18Q99952 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.16■□□□□ 0.82
PTPN18Q99952 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
PTPN18Q99952 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN18Q99952 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN18Q99952 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN18Q99952 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN18Q99952 AC236430.1-201ENST00000402231 743 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms