Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NPAS1Q99742 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS1Q99742 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS1Q99742 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS1Q99742 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS1Q99742 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.19■□□□□ 0.18
NPAS1Q99742 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NPAS1Q99742 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NPAS1Q99742 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS1Q99742 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS1Q99742 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS1Q99742 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS1Q99742 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS1Q99742 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS1Q99742 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NPAS1Q99742 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS1Q99742 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
NPAS1Q99742 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.18■□□□□ 0.18
NPAS1Q99742 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS1Q99742 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS1Q99742 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.18■□□□□ 0.18
NPAS1Q99742 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS1Q99742 AC011840.4-201ENST00000578471 627 ntBASIC16.18■□□□□ 0.18
NPAS1Q99742 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS1Q99742 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NPAS1Q99742 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.18■□□□□ 0.18
NPAS1Q99742 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 AC012313.10-201ENST00000623509 926 ntBASIC16.18■□□□□ 0.18
NPAS1Q99742 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS1Q99742 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS1Q99742 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
NPAS1Q99742 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS1Q99742 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS1Q99742 AC009053.2-201ENST00000563701 2365 ntBASIC16.18■□□□□ 0.18
NPAS1Q99742 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 AC134043.2-201ENST00000624206 2238 ntBASIC16.17■□□□□ 0.18
NPAS1Q99742 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NPAS1Q99742 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NPAS1Q99742 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 IGHV3-47-201ENST00000425060 335 ntBASIC16.17■□□□□ 0.18
NPAS1Q99742 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.17■□□□□ 0.18
NPAS1Q99742 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.17■□□□□ 0.18
NPAS1Q99742 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.17■□□□□ 0.18
NPAS1Q99742 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS1Q99742 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS1Q99742 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NPAS1Q99742 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NPAS1Q99742 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NPAS1Q99742 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
NPAS1Q99742 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NPAS1Q99742 AC022898.2-201ENST00000616822 1312 ntBASIC16.17■□□□□ 0.18
NPAS1Q99742 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
NPAS1Q99742 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS1Q99742 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS1Q99742 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS1Q99742 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NPAS1Q99742 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS1Q99742 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS1Q99742 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS1Q99742 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS1Q99742 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS1Q99742 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS1Q99742 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.16■□□□□ 0.18
NPAS1Q99742 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS1Q99742 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS1Q99742 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NPAS1Q99742 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
NPAS1Q99742 AC141586.5-201ENST00000624546 2050 ntBASIC16.16■□□□□ 0.18
NPAS1Q99742 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms