Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDC6Q99741 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC6Q99741 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC6Q99741 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC6Q99741 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.09■□□□□ 0.33
CDC6Q99741 ACTG1P14-201ENST00000446382 1122 ntBASIC17.09■□□□□ 0.33
CDC6Q99741 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC6Q99741 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.09■□□□□ 0.33
CDC6Q99741 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC6Q99741 AC106028.4-201ENST00000614509 607 ntBASIC17.09■□□□□ 0.33
CDC6Q99741 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDC6Q99741 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC6Q99741 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC6Q99741 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDC6Q99741 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC6Q99741 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC6Q99741 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC6Q99741 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC6Q99741 AL499627.1-201ENST00000569373 2188 ntBASIC17.08■□□□□ 0.33
CDC6Q99741 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDC6Q99741 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.08■□□□□ 0.33
CDC6Q99741 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC6Q99741 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC6Q99741 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.08■□□□□ 0.32
CDC6Q99741 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.08■□□□□ 0.32
CDC6Q99741 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.08■□□□□ 0.32
CDC6Q99741 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CDC6Q99741 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC6Q99741 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC6Q99741 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC6Q99741 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDC6Q99741 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.08■□□□□ 0.32
CDC6Q99741 SIGLEC30P-201ENST00000455569 941 ntBASIC17.08■□□□□ 0.32
CDC6Q99741 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CDC6Q99741 AC010654.1-201ENST00000615722 808 ntBASIC17.08■□□□□ 0.32
CDC6Q99741 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.08■□□□□ 0.32
CDC6Q99741 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC6Q99741 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC6Q99741 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDC6Q99741 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC6Q99741 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC6Q99741 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.07■□□□□ 0.32
CDC6Q99741 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC6Q99741 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.07■□□□□ 0.32
CDC6Q99741 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.07■□□□□ 0.32
CDC6Q99741 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.07■□□□□ 0.32
CDC6Q99741 AC004790.2-201ENST00000623588 572 ntBASIC17.07■□□□□ 0.32
CDC6Q99741 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 TNXA-203ENST00000507684 2038 ntBASIC17.07■□□□□ 0.32
CDC6Q99741 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.07■□□□□ 0.32
CDC6Q99741 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC6Q99741 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDC6Q99741 AC132938.6-201ENST00000623828 1655 ntBASIC17.07■□□□□ 0.32
CDC6Q99741 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC6Q99741 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDC6Q99741 AL353593.2-201ENST00000602529 1483 ntBASIC17.06■□□□□ 0.32
CDC6Q99741 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC6Q99741 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDC6Q99741 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC6Q99741 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC6Q99741 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC6Q99741 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDC6Q99741 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC6Q99741 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC6Q99741 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC6Q99741 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.06■□□□□ 0.32
CDC6Q99741 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC6Q99741 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC6Q99741 MRPL20P1-201ENST00000400819 433 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms