Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 SLC25A1P3-201ENST00000395415 828 ntBASIC15.32■□□□□ 0.04
GFI1Q99684 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.32■□□□□ 0.04
GFI1Q99684 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.32■□□□□ 0.04
GFI1Q99684 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.32■□□□□ 0.04
GFI1Q99684 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
GFI1Q99684 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
GFI1Q99684 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.31■□□□□ 0.04
GFI1Q99684 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GFI1Q99684 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 AL603756.1-201ENST00000606511 2163 ntBASIC15.31■□□□□ 0.04
GFI1Q99684 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GFI1Q99684 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GFI1Q99684 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GFI1Q99684 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
GFI1Q99684 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.31■□□□□ 0.04
GFI1Q99684 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GFI1Q99684 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GFI1Q99684 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
GFI1Q99684 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.31■□□□□ 0.04
GFI1Q99684 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GFI1Q99684 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
GFI1Q99684 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.3■□□□□ 0.04
GFI1Q99684 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.3■□□□□ 0.04
GFI1Q99684 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.3■□□□□ 0.04
GFI1Q99684 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
GFI1Q99684 RNF216P1-203ENST00000404404 2427 ntBASIC15.3■□□□□ 0.04
GFI1Q99684 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 AC005104.2-201ENST00000427818 678 ntBASIC15.3■□□□□ 0.04
GFI1Q99684 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 AL355355.2-201ENST00000442321 338 ntBASIC15.3■□□□□ 0.04
GFI1Q99684 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GFI1Q99684 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.3■□□□□ 0.04
GFI1Q99684 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.3■□□□□ 0.04
GFI1Q99684 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GFI1Q99684 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.3■□□□□ 0.04
GFI1Q99684 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.3■□□□□ 0.04
GFI1Q99684 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.3■□□□□ 0.04
GFI1Q99684 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.3■□□□□ 0.04
GFI1Q99684 MIR3917-201ENST00000580971 93 ntBASIC15.3■□□□□ 0.04
GFI1Q99684 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 AC008687.5-201ENST00000593746 558 ntBASIC15.3■□□□□ 0.04
GFI1Q99684 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 AC026471.5-201ENST00000615068 467 ntBASIC15.3■□□□□ 0.04
GFI1Q99684 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.3■□□□□ 0.04
GFI1Q99684 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.3■□□□□ 0.04
GFI1Q99684 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GFI1Q99684 AL049637.2-201ENST00000641778 930 ntBASIC15.3■□□□□ 0.04
GFI1Q99684 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GFI1Q99684 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GFI1Q99684 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFI1Q99684 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1Q99684 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.29■□□□□ 0.04
GFI1Q99684 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms