Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 PMPCAP1-201ENST00000508114 1576 ntBASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 AL354751.1-201ENST00000412768 1863 ntBASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 KRT18P67-201ENST00000432816 1264 ntBASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 IGHV3-52-201ENST00000519770 353 ntBASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP1Q96SZ6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDK5RAP1Q96SZ6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.54
CDK5RAP1Q96SZ6 AL353593.2-201ENST00000602529 1483 ntBASIC18.39■□□□□ 0.54
CDK5RAP1Q96SZ6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDK5RAP1Q96SZ6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDK5RAP1Q96SZ6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 MYCLP1-201ENST00000372451 1075 ntBASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 AC002558.1-201ENST00000488906 803 ntBASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 AL773604.1-201ENST00000617417 272 ntBASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK5RAP1Q96SZ6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 RPS2P28-201ENST00000314255 741 ntBASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 AC009078.2-202ENST00000463353 338 ntBASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 AC073592.4-201ENST00000623827 446 ntBASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 TP73-AS1-207ENST00000624167 988 ntBASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms