Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 AC005332.3-201ENST00000589904 676 ntBASIC16.86■□□□□ 0.29
BBS4Q96RK4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.86■□□□□ 0.29
BBS4Q96RK4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.86■□□□□ 0.29
BBS4Q96RK4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BBS4Q96RK4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 AC083849.1-201ENST00000615227 514 ntBASIC16.85■□□□□ 0.29
BBS4Q96RK4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.85■□□□□ 0.29
BBS4Q96RK4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.85■□□□□ 0.29
BBS4Q96RK4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BBS4Q96RK4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.84■□□□□ 0.29
BBS4Q96RK4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 AC112698.1-201ENST00000510299 916 ntBASIC16.84■□□□□ 0.29
BBS4Q96RK4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 Z83836.1-201ENST00000624605 1642 ntBASIC16.84■□□□□ 0.29
BBS4Q96RK4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
BBS4Q96RK4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
BBS4Q96RK4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms