Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 FGFR3P6-201ENST00000457012 610 ntBASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 AC002558.1-201ENST00000488906 803 ntBASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 AC008608.2-201ENST00000606089 416 ntBASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 AL031008.1-201ENST00000619963 541 ntBASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 KRT8P10-201ENST00000450021 1447 ntBASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 AC012317.2-201ENST00000623305 2251 ntBASIC17.72■□□□□ 0.43
ECHDC3Q96DC8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 MTDHP3-201ENST00000594186 672 ntBASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 AC073592.4-201ENST00000623827 446 ntBASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
ECHDC3Q96DC8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms