Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 CROCCP2-202ENST00000412962 2773 ntBASIC14.04□□□□□ -0.16
NPIPB3Q92617 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 AC099398.1-201ENST00000567919 2776 ntBASIC14.04□□□□□ -0.16
NPIPB3Q92617 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
NPIPB3Q92617 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB3Q92617 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 PVRIG2P-201ENST00000435460 978 ntBASIC14.03□□□□□ -0.16
NPIPB3Q92617 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 NEK4P2-201ENST00000580004 1012 ntBASIC14.03□□□□□ -0.16
NPIPB3Q92617 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 AC010947.1-201ENST00000623454 693 ntBASIC14.03□□□□□ -0.16
NPIPB3Q92617 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 KRT8P9-201ENST00000558927 1449 ntBASIC14.03□□□□□ -0.16
NPIPB3Q92617 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 FER1L4-210ENST00000615531 5998 ntBASIC14.03□□□□□ -0.16
NPIPB3Q92617 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB3Q92617 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NPIPB3Q92617 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPB3Q92617 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.02□□□□□ -0.16
NPIPB3Q92617 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NPIPB3Q92617 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
NPIPB3Q92617 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.02□□□□□ -0.16
NPIPB3Q92617 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NPIPB3Q92617 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPB3Q92617 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NPIPB3Q92617 LINC00304-203ENST00000565008 1864 ntBASIC14.02□□□□□ -0.16
NPIPB3Q92617 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPB3Q92617 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.02□□□□□ -0.16
NPIPB3Q92617 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPB3Q92617 HLA-J-201ENST00000462773 1622 ntBASIC14.02□□□□□ -0.16
NPIPB3Q92617 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPB3Q92617 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPB3Q92617 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NPIPB3Q92617 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.02□□□□□ -0.17
NPIPB3Q92617 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPB3Q92617 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPB3Q92617 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPB3Q92617 HMGA1P5-201ENST00000412453 271 ntBASIC14.02□□□□□ -0.17
NPIPB3Q92617 ECEL1P2-202ENST00000465689 757 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms