Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.66■□□□□ 0.58
RNF139Q8WU17 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF139Q8WU17 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF139Q8WU17 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF139Q8WU17 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF139Q8WU17 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF139Q8WU17 SLC25A6P5-201ENST00000435663 894 ntBASIC18.66■□□□□ 0.58
RNF139Q8WU17 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 AC009533.2-201ENST00000543664 586 ntBASIC18.66■□□□□ 0.58
RNF139Q8WU17 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 AC091304.2-201ENST00000564639 760 ntBASIC18.66■□□□□ 0.58
RNF139Q8WU17 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 AC116407.2-201ENST00000613639 860 ntBASIC18.66■□□□□ 0.58
RNF139Q8WU17 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF139Q8WU17 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF139Q8WU17 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF139Q8WU17 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 AC068880.1-201ENST00000507289 2297 ntBASIC18.66■□□□□ 0.58
RNF139Q8WU17 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF139Q8WU17 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF139Q8WU17 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF139Q8WU17 AC125634.1-201ENST00000438758 1403 ntBASIC18.66■□□□□ 0.58
RNF139Q8WU17 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 AL450487.1-201ENST00000426799 995 ntBASIC18.65■□□□□ 0.58
RNF139Q8WU17 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 AL138831.2-201ENST00000606564 490 ntBASIC18.65■□□□□ 0.58
RNF139Q8WU17 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF139Q8WU17 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF139Q8WU17 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
RNF139Q8WU17 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF139Q8WU17 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.64■□□□□ 0.58
RNF139Q8WU17 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
RNF139Q8WU17 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 KRT16P4-201ENST00000453883 522 ntBASIC18.64■□□□□ 0.57
RNF139Q8WU17 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 BNIP3P18-201ENST00000593976 575 ntBASIC18.64■□□□□ 0.57
RNF139Q8WU17 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RNF139Q8WU17 KRT8P47-201ENST00000604727 1398 ntBASIC18.64■□□□□ 0.57
RNF139Q8WU17 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF139Q8WU17 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms