Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 KRT18P38-201ENST00000449496 1282 ntBASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 AC009154.2-201ENST00000621177 724 ntBASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP1Q8TDR0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 AL355312.1-201ENST00000407115 2176 ntBASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 LTB4R2-202ENST00000528054 3092 ntBASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 HBZP1-201ENST00000354915 429 ntBASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 IGHGP-201ENST00000390555 1178 ntBASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP1Q8TDR0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TRAF3IP1Q8TDR0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms