Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRPM4Q8TD43 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.87■□□□□ 0.93
TRPM4Q8TD43 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRPM4Q8TD43 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
TRPM4Q8TD43 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRPM4Q8TD43 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRPM4Q8TD43 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
TRPM4Q8TD43 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TRPM4Q8TD43 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 TIMM8BP1-201ENST00000452384 211 ntBASIC20.86■□□□□ 0.93
TRPM4Q8TD43 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 AC015911.4-201ENST00000588022 1070 ntBASIC20.86■□□□□ 0.93
TRPM4Q8TD43 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.86■□□□□ 0.93
TRPM4Q8TD43 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 PMS2P4-201ENST00000412466 1052 ntBASIC20.85■□□□□ 0.93
TRPM4Q8TD43 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.85■□□□□ 0.93
TRPM4Q8TD43 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 MIR661-201ENST00000384842 89 ntBASIC20.84■□□□□ 0.93
TRPM4Q8TD43 FAM185BP-201ENST00000443595 716 ntBASIC20.84■□□□□ 0.93
TRPM4Q8TD43 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 ACTL9-202ENST00000612068 1252 ntBASIC20.84■□□□□ 0.93
TRPM4Q8TD43 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRPM4Q8TD43 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.83■□□□□ 0.93
TRPM4Q8TD43 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.83■□□□□ 0.92
TRPM4Q8TD43 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.83■□□□□ 0.92
TRPM4Q8TD43 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.82■□□□□ 0.92
TRPM4Q8TD43 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
TRPM4Q8TD43 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.82■□□□□ 0.92
TRPM4Q8TD43 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.82■□□□□ 0.92
TRPM4Q8TD43 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRPM4Q8TD43 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms