Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 GCSHP5-201ENST00000443090 522 ntBASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 AL158047.1-201ENST00000445918 881 ntBASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 MIR4674-201ENST00000582457 87 ntBASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 AC073648.6-201ENST00000641589 218 ntBASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 AC132938.6-201ENST00000623828 1655 ntBASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 AC100803.2-201ENST00000562459 1963 ntBASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IL1Q8TBN0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 AC142381.4-202ENST00000563973 229 ntBASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms