Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC009078.2-202ENST00000463353 338 ntBASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDND2Q8NHS1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 KRT16P4-201ENST00000453883 522 ntBASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 AL160237.2-201ENST00000556165 472 ntBASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 AC104692.2-201ENST00000603054 253 ntBASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDND2Q8NHS1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 AC073592.3-201ENST00000625118 1834 ntBASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 AC126763.1-201ENST00000552015 2118 ntBASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 ANO7L1-203ENST00000602586 1720 ntBASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDND2Q8NHS1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms