Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 AC005104.2-201ENST00000427818 678 ntBASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 AC138894.3-201ENST00000603787 634 ntBASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 AC019129.2-201ENST00000609837 1235 ntBASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 LINC01451-201ENST00000623792 534 ntBASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZIC4Q8N9L1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 SIRPAP1-201ENST00000448467 1770 ntBASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 AC133963.1-201ENST00000504166 1679 ntBASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 AL049757.1-201ENST00000616842 1596 ntBASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 NUS1P2-201ENST00000417358 873 ntBASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 KRT16P4-201ENST00000453883 522 ntBASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 AC012313.10-201ENST00000623509 926 ntBASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZIC4Q8N9L1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 LINC00896-202ENST00000609602 2128 ntBASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 TSPY19P-201ENST00000418461 509 ntBASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 AC103564.2-201ENST00000432853 1299 ntBASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 TSPY18P-201ENST00000441642 509 ntBASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms