Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 LINC01451-201ENST00000623792 534 ntBASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 LINC00304-203ENST00000565008 1864 ntBASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 BCL2-203ENST00000589955 5011 ntBASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 AL138688.1-201ENST00000624851 1594 ntBASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LSMEM1Q8N8F7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 AC090340.1-201ENST00000620778 4980 ntBASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 AL353692.3-201ENST00000407031 1396 ntBASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 AC112907.2-201ENST00000448639 330 ntBASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 AC112698.1-201ENST00000510299 916 ntBASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 GPR32P1-201ENST00000601788 811 ntBASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
LSMEM1Q8N8F7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 HLA-J-201ENST00000462773 1622 ntBASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LSMEM1Q8N8F7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.27■□□□□ 0.2
LSMEM1Q8N8F7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms