Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.01■□□□□ 0.47
SYNPOQ8N3V7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 AC005829.1-201ENST00000570002 483 ntBASIC18■□□□□ 0.47
SYNPOQ8N3V7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 AC002310.6-201ENST00000624451 1377 ntBASIC18■□□□□ 0.47
SYNPOQ8N3V7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYNPOQ8N3V7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18■□□□□ 0.47
SYNPOQ8N3V7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 WIZP1-201ENST00000531444 2299 ntBASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SYNPOQ8N3V7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 YBX1P5-201ENST00000509441 847 ntBASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 KRT8P47-201ENST00000604727 1398 ntBASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 AC132938.6-201ENST00000623828 1655 ntBASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNPOQ8N3V7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms