Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 RBM17P1-201ENST00000453646 1190 ntBASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 EGLN1P1-201ENST00000531623 762 ntBASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 AP003071.4-201ENST00000562276 1284 ntBASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 AC142381.4-202ENST00000563973 229 ntBASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 OR6D1P-203ENST00000641209 4860 ntBASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 GXYLT1P4-201ENST00000613576 1192 ntBASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01561Q8N1V8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms