Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CCDC60Q8IWA6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 SIGLEC16-201ENST00000599858 1437 ntBASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 SLC25A1P1-201ENST00000528351 927 ntBASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC60Q8IWA6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 AC012640.2-201ENST00000561606 901 ntBASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 AC109462.3-201ENST00000573934 613 ntBASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 AC148477.5-201ENST00000625164 1645 ntBASIC19.69■□□□□ 0.74
CCDC60Q8IWA6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 OR7E14P-202ENST00000530490 1290 ntBASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 AC139887.3-201ENST00000568585 713 ntBASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC60Q8IWA6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 AC093909.1-201ENST00000504731 1122 ntBASIC19.67■□□□□ 0.74
CCDC60Q8IWA6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms