Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 KRT18P65-201ENST00000439811 1286 ntBASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 AC006011.2-201ENST00000621313 1158 ntBASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 KRT8P47-201ENST00000604727 1398 ntBASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 ZNF444P1-201ENST00000559497 298 ntBASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 AC116407.2-201ENST00000613639 860 ntBASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 AC108860.2-201ENST00000562760 2183 ntBASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LINC00346Q8IVM7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 RNF152P1-201ENST00000397754 604 ntBASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 AK4P3-201ENST00000418260 669 ntBASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 TSPY12P-201ENST00000421279 868 ntBASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 TSPY5P-201ENST00000426936 936 ntBASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 AC112907.2-201ENST00000448639 330 ntBASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 AP003733.1-201ENST00000491725 852 ntBASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 LINC01023-201ENST00000606054 436 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms