Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD1LQ86WJ1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CHD1LQ86WJ1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 AL645929.1-201ENST00000420084 975 ntBASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 TMPOP1-202ENST00000424642 1267 ntBASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 LYSMD4-203ENST00000378904 2122 ntBASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 AC010460.3-201ENST00000511359 1579 ntBASIC21.91■■□□□ 1.1
CHD1LQ86WJ1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD1LQ86WJ1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHD1LQ86WJ1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHD1LQ86WJ1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHD1LQ86WJ1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHD1LQ86WJ1 AC097374.2-201ENST00000618617 1306 ntBASIC21.89■■□□□ 1.1
CHD1LQ86WJ1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 PCDHA12-202ENST00000613593 2588 ntBASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms