Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 PHGDH-209ENST00000641074 1780 ntBASIC12.25□□□□□ -0.45
CSMD3Q7Z407 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 GPS2P2-201ENST00000430745 888 ntBASIC12.25□□□□□ -0.45
CSMD3Q7Z407 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 ADM-207ENST00000530439 1839 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 OR8S1-201ENST00000310194 1080 ntBASIC12.24□□□□□ -0.45
CSMD3Q7Z407 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 AC022494.1-201ENST00000466044 728 ntBASIC12.24□□□□□ -0.45
CSMD3Q7Z407 AC126763.1-201ENST00000552015 2118 ntBASIC12.24□□□□□ -0.45
CSMD3Q7Z407 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 AC004835.2-201ENST00000603762 682 ntBASIC12.24□□□□□ -0.45
CSMD3Q7Z407 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 FO538757.1-201ENST00000623083 1397 ntBASIC12.24□□□□□ -0.45
CSMD3Q7Z407 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD3Q7Z407 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 FAM207CP-201ENST00000443486 507 ntBASIC12.23□□□□□ -0.45
CSMD3Q7Z407 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 AC025048.6-201ENST00000634326 1161 ntBASIC12.23□□□□□ -0.45
CSMD3Q7Z407 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.23□□□□□ -0.45
CSMD3Q7Z407 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms