Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 BX276092.7-203ENST00000637198 1536 ntBASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.26■■□□□ 1.15
RGPD4Q7Z3J3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 IGHV3-72-202ENST00000621503 303 ntBASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 AC100757.3-201ENST00000622361 1406 ntBASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 AL671277.1-201ENST00000429656 993 ntBASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 SPCS2P4-201ENST00000436160 681 ntBASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC22.25■■□□□ 1.15
RGPD4Q7Z3J3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 AL049812.1-201ENST00000432563 2267 ntBASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 KRT17P7-201ENST00000451704 1104 ntBASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.24■■□□□ 1.15
RGPD4Q7Z3J3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 AC079776.1-201ENST00000401540 1152 ntBASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 HILS1-202ENST00000545329 423 ntBASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RGPD4Q7Z3J3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 DUTP2-201ENST00000519164 463 ntBASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 KRT8P23-201ENST00000560090 1207 ntBASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 GNAS-203ENST00000306120 1878 ntBASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 AC022144.1-201ENST00000602255 1580 ntBASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 TMPRSS11CP-201ENST00000453277 683 ntBASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RGPD4Q7Z3J3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms