Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 AL121761.2-201ENST00000598007 1648 ntBASIC14.69□□□□□ -0.06
VPS13CQ709C8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 AC004461.1-201ENST00000412461 403 ntBASIC14.69□□□□□ -0.06
VPS13CQ709C8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 AC069262.1-201ENST00000539058 672 ntBASIC14.69□□□□□ -0.06
VPS13CQ709C8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS13CQ709C8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13CQ709C8 AC025580.3-201ENST00000617932 1424 ntBASIC14.68□□□□□ -0.06
VPS13CQ709C8 AC063926.2-201ENST00000623766 1308 ntBASIC14.68□□□□□ -0.06
VPS13CQ709C8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13CQ709C8 AC099522.2-201ENST00000607001 744 ntBASIC14.68□□□□□ -0.06
VPS13CQ709C8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS13CQ709C8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13CQ709C8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13CQ709C8 AC092919.2-201ENST00000623631 1645 ntBASIC14.67□□□□□ -0.06
VPS13CQ709C8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13CQ709C8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13CQ709C8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13CQ709C8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 MIR4751-201ENST00000578027 74 ntBASIC14.67□□□□□ -0.06
VPS13CQ709C8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13CQ709C8 AP000997.3-201ENST00000623333 2250 ntBASIC14.67□□□□□ -0.06
VPS13CQ709C8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13CQ709C8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13CQ709C8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13CQ709C8 AC015922.1-201ENST00000421102 1152 ntBASIC14.67□□□□□ -0.06
VPS13CQ709C8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13CQ709C8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS13CQ709C8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 GNAS-203ENST00000306120 1878 ntBASIC14.66□□□□□ -0.06
VPS13CQ709C8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.66□□□□□ -0.06
VPS13CQ709C8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.66□□□□□ -0.06
VPS13CQ709C8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13CQ709C8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.66□□□□□ -0.06
VPS13CQ709C8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms