Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC62Q6P9F0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC62Q6P9F0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC62Q6P9F0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC62Q6P9F0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC62Q6P9F0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC62Q6P9F0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC62Q6P9F0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC62Q6P9F0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC62Q6P9F0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 SIRPAP1-201ENST00000448467 1770 ntBASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 AC135776.1-201ENST00000319817 2481 ntBASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC62Q6P9F0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 AC073621.1-201ENST00000392730 636 ntBASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 AC132938.5-201ENST00000624980 1813 ntBASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC62Q6P9F0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 AC092865.5-201ENST00000545435 363 ntBASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 AL356488.2-201ENST00000602755 427 ntBASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC62Q6P9F0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC62Q6P9F0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms