Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
TMEM53Q6P2H8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 MTMR9LP-203ENST00000426597 1545 ntBASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 MIR4674-201ENST00000582457 87 ntBASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 AC008556.1-201ENST00000610908 2040 ntBASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM53Q6P2H8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 AC036111.1-201ENST00000533973 1582 ntBASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 INGX-201ENST00000359239 846 ntBASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 MIR564-202ENST00000385049 94 ntBASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 LIN28AP1-201ENST00000429574 405 ntBASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 AL357033.4-201ENST00000617703 1807 ntBASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM53Q6P2H8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms