Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARS2Q5ST30 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 AL020989.1-201ENST00000422979 469 ntBASIC18.75■□□□□ 0.59
VARS2Q5ST30 DDX43P3-201ENST00000441064 443 ntBASIC18.75■□□□□ 0.59
VARS2Q5ST30 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 RNA5SP415-201ENST00000517246 115 ntBASIC18.75■□□□□ 0.59
VARS2Q5ST30 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 LINC02084-201ENST00000606069 1096 ntBASIC18.75■□□□□ 0.59
VARS2Q5ST30 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.75■□□□□ 0.59
VARS2Q5ST30 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARS2Q5ST30 BX276092.7-203ENST00000637198 1536 ntBASIC18.74■□□□□ 0.59
VARS2Q5ST30 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
VARS2Q5ST30 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.74■□□□□ 0.59
VARS2Q5ST30 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 AC009113.1-201ENST00000570267 2443 ntBASIC18.74■□□□□ 0.59
VARS2Q5ST30 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.74■□□□□ 0.59
VARS2Q5ST30 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.74■□□□□ 0.59
VARS2Q5ST30 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.74■□□□□ 0.59
VARS2Q5ST30 AC109462.3-201ENST00000573934 613 ntBASIC18.74■□□□□ 0.59
VARS2Q5ST30 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.74■□□□□ 0.59
VARS2Q5ST30 TERC-201ENST00000602385 541 ntBASIC18.74■□□□□ 0.59
VARS2Q5ST30 Z83851.2-201ENST00000609564 659 ntBASIC18.74■□□□□ 0.59
VARS2Q5ST30 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.74■□□□□ 0.59
VARS2Q5ST30 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.74■□□□□ 0.59
VARS2Q5ST30 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
VARS2Q5ST30 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 PMS2P7-201ENST00000506558 1336 ntBASIC18.74■□□□□ 0.59
VARS2Q5ST30 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VARS2Q5ST30 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 KLF4P1-201ENST00000412782 1185 ntBASIC18.73■□□□□ 0.59
VARS2Q5ST30 HMGN1P19-201ENST00000436976 333 ntBASIC18.73■□□□□ 0.59
VARS2Q5ST30 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 AC034105.1-201ENST00000563488 319 ntBASIC18.73■□□□□ 0.59
VARS2Q5ST30 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VARS2Q5ST30 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.73■□□□□ 0.59
VARS2Q5ST30 AC148477.5-201ENST00000625164 1645 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms