Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.41■□□□□ 0.38
SFT2D3Q587I9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D3Q587I9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 PCDHB19P-201ENST00000570871 2371 ntBASIC17.4■□□□□ 0.38
SFT2D3Q587I9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 AC034236.2-201ENST00000606662 1610 ntBASIC17.4■□□□□ 0.38
SFT2D3Q587I9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 AL031133.1-201ENST00000406807 723 ntBASIC17.4■□□□□ 0.38
SFT2D3Q587I9 SPDYE15P-201ENST00000424157 909 ntBASIC17.4■□□□□ 0.38
SFT2D3Q587I9 AL671277.2-201ENST00000458060 996 ntBASIC17.4■□□□□ 0.38
SFT2D3Q587I9 SEC1P-202ENST00000473944 940 ntBASIC17.4■□□□□ 0.38
SFT2D3Q587I9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.4■□□□□ 0.38
SFT2D3Q587I9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D3Q587I9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.39■□□□□ 0.38
SFT2D3Q587I9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.39■□□□□ 0.38
SFT2D3Q587I9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 AC112907.2-201ENST00000448639 330 ntBASIC17.39■□□□□ 0.37
SFT2D3Q587I9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.39■□□□□ 0.37
SFT2D3Q587I9 KRT8P7-201ENST00000533003 1432 ntBASIC17.38■□□□□ 0.37
SFT2D3Q587I9 HOXB1-202ENST00000577092 1414 ntBASIC17.38■□□□□ 0.37
SFT2D3Q587I9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFT2D3Q587I9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFT2D3Q587I9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFT2D3Q587I9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SFT2D3Q587I9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SFT2D3Q587I9 AL357033.4-201ENST00000617703 1807 ntBASIC17.38■□□□□ 0.37
SFT2D3Q587I9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFT2D3Q587I9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.38■□□□□ 0.37
SFT2D3Q587I9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms