Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 KRT18P23-201ENST00000435622 1283 ntBASIC15.93■□□□□ 0.14
CCDC58Q4VC31 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 SLC25A1P4-201ENST00000567977 778 ntBASIC15.93■□□□□ 0.14
CCDC58Q4VC31 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 AC005052.1-201ENST00000625181 2492 ntBASIC15.92■□□□□ 0.14
CCDC58Q4VC31 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 C1QBPP2-201ENST00000528754 825 ntBASIC15.92■□□□□ 0.14
CCDC58Q4VC31 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 AC006058.3-201ENST00000606217 1069 ntBASIC15.92■□□□□ 0.14
CCDC58Q4VC31 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 AL024508.2-201ENST00000607749 1894 ntBASIC15.92■□□□□ 0.14
CCDC58Q4VC31 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 AL135905.2-201ENST00000584934 1404 ntBASIC15.92■□□□□ 0.14
CCDC58Q4VC31 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC58Q4VC31 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 HLA-L-209ENST00000420110 1011 ntBASIC15.91■□□□□ 0.14
CCDC58Q4VC31 AC116562.2-201ENST00000507042 360 ntBASIC15.91■□□□□ 0.14
CCDC58Q4VC31 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 KRT18P6-201ENST00000555540 1265 ntBASIC15.91■□□□□ 0.14
CCDC58Q4VC31 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 AC023824.1-201ENST00000562945 2975 ntBASIC15.91■□□□□ 0.14
CCDC58Q4VC31 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC58Q4VC31 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms