Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
HMGXB3Q12766 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
HMGXB3Q12766 ADM-207ENST00000530439 1839 ntTSL 2 BASIC30.93■■■□□ 2.54
HMGXB3Q12766 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
HMGXB3Q12766 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC30.93■■■□□ 2.54
HMGXB3Q12766 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC30.93■■■□□ 2.54
HMGXB3Q12766 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
HMGXB3Q12766 CR383656.12-201ENST00000549567 513 ntBASIC30.93■■■□□ 2.54
HMGXB3Q12766 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
HMGXB3Q12766 AC025048.6-201ENST00000634326 1161 ntBASIC30.93■■■□□ 2.54
HMGXB3Q12766 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
HMGXB3Q12766 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
HMGXB3Q12766 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
HMGXB3Q12766 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
HMGXB3Q12766 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
HMGXB3Q12766 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
HMGXB3Q12766 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
HMGXB3Q12766 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC30.92■■■□□ 2.54
HMGXB3Q12766 AC092580.3-201ENST00000430932 139 ntBASIC30.92■■■□□ 2.54
HMGXB3Q12766 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
HMGXB3Q12766 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC30.92■■■□□ 2.54
HMGXB3Q12766 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC30.92■■■□□ 2.54
HMGXB3Q12766 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
HMGXB3Q12766 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
HMGXB3Q12766 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC30.92■■■□□ 2.54
HMGXB3Q12766 AC007952.6-201ENST00000573168 2673 ntBASIC30.92■■■□□ 2.54
HMGXB3Q12766 AC003957.1-201ENST00000625108 2673 ntBASIC30.92■■■□□ 2.54
HMGXB3Q12766 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC30.91■■■□□ 2.54
HMGXB3Q12766 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
HMGXB3Q12766 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC30.91■■■□□ 2.54
HMGXB3Q12766 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
HMGXB3Q12766 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC30.91■■■□□ 2.54
HMGXB3Q12766 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC30.91■■■□□ 2.54
HMGXB3Q12766 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
HMGXB3Q12766 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC30.91■■■□□ 2.54
HMGXB3Q12766 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
HMGXB3Q12766 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
HMGXB3Q12766 MRPS18AP1-201ENST00000414458 589 ntBASIC30.91■■■□□ 2.54
HMGXB3Q12766 GOLGA6L11P-201ENST00000417252 1298 ntBASIC30.91■■■□□ 2.54
HMGXB3Q12766 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC30.91■■■□□ 2.54
HMGXB3Q12766 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
HMGXB3Q12766 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
HMGXB3Q12766 NOP2-220ENST00000545915 630 ntTSL 2 BASIC30.91■■■□□ 2.54
HMGXB3Q12766 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
HMGXB3Q12766 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
HMGXB3Q12766 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
HMGXB3Q12766 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC30.9■■■□□ 2.54
HMGXB3Q12766 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC30.9■■■□□ 2.54
HMGXB3Q12766 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
HMGXB3Q12766 CALY-202ENST00000368555 783 ntTSL 2 BASIC30.9■■■□□ 2.54
HMGXB3Q12766 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC30.9■■■□□ 2.54
HMGXB3Q12766 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
HMGXB3Q12766 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC30.9■■■□□ 2.54
HMGXB3Q12766 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC30.9■■■□□ 2.54
HMGXB3Q12766 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
HMGXB3Q12766 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC30.9■■■□□ 2.54
HMGXB3Q12766 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
HMGXB3Q12766 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC30.89■■■□□ 2.54
HMGXB3Q12766 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
HMGXB3Q12766 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC30.89■■■□□ 2.54
HMGXB3Q12766 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC30.89■■■□□ 2.54
HMGXB3Q12766 IGHV3-52-201ENST00000519770 353 ntBASIC30.89■■■□□ 2.54
HMGXB3Q12766 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
HMGXB3Q12766 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC30.89■■■□□ 2.54
HMGXB3Q12766 MIR6752-201ENST00000618442 71 ntBASIC30.89■■■□□ 2.54
HMGXB3Q12766 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
HMGXB3Q12766 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
HMGXB3Q12766 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC30.89■■■□□ 2.54
HMGXB3Q12766 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC30.89■■■□□ 2.54
HMGXB3Q12766 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
HMGXB3Q12766 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC30.89■■■□□ 2.53
HMGXB3Q12766 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
HMGXB3Q12766 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC30.88■■■□□ 2.53
HMGXB3Q12766 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
HMGXB3Q12766 SERF2-217ENST00000630046 862 ntTSL 5 BASIC30.88■■■□□ 2.53
HMGXB3Q12766 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
HMGXB3Q12766 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
HMGXB3Q12766 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
HMGXB3Q12766 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
HMGXB3Q12766 HARS-203ENST00000431330 1774 ntTSL 2 BASIC30.88■■■□□ 2.53
HMGXB3Q12766 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
HMGXB3Q12766 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC30.88■■■□□ 2.53
HMGXB3Q12766 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
HMGXB3Q12766 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
HMGXB3Q12766 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC30.88■■■□□ 2.53
HMGXB3Q12766 HNRNPA1P40-201ENST00000426371 1278 ntBASIC30.88■■■□□ 2.53
HMGXB3Q12766 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC30.88■■■□□ 2.53
HMGXB3Q12766 SPCS2P4-201ENST00000436160 681 ntBASIC30.88■■■□□ 2.53
HMGXB3Q12766 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC30.88■■■□□ 2.53
HMGXB3Q12766 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC30.88■■■□□ 2.53
HMGXB3Q12766 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
HMGXB3Q12766 AL645728.2-201ENST00000641974 660 ntBASIC30.88■■■□□ 2.53
HMGXB3Q12766 CLDN5-201ENST00000403084 2357 ntBASIC30.88■■■□□ 2.53
HMGXB3Q12766 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
HMGXB3Q12766 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC30.87■■■□□ 2.53
HMGXB3Q12766 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC30.87■■■□□ 2.53
HMGXB3Q12766 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
HMGXB3Q12766 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC30.87■■■□□ 2.53
HMGXB3Q12766 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HMGXB3Q12766 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms