Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CDKL1Q00532 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.5■□□□□ 0.39
CDKL1Q00532 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL1Q00532 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL1Q00532 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.5■□□□□ 0.39
CDKL1Q00532 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.5■□□□□ 0.39
CDKL1Q00532 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 LINC01238-205ENST00000567549 1107 ntBASIC17.5■□□□□ 0.39
CDKL1Q00532 AC116407.2-201ENST00000613639 860 ntBASIC17.5■□□□□ 0.39
CDKL1Q00532 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.5■□□□□ 0.39
CDKL1Q00532 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.5■□□□□ 0.39
CDKL1Q00532 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL1Q00532 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL1Q00532 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDKL1Q00532 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDKL1Q00532 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDKL1Q00532 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL1Q00532 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL1Q00532 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CDKL1Q00532 AC100803.2-201ENST00000562459 1963 ntBASIC17.49■□□□□ 0.39
CDKL1Q00532 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CDKL1Q00532 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDKL1Q00532 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDKL1Q00532 LINC01311-201ENST00000565162 1445 ntBASIC17.49■□□□□ 0.39
CDKL1Q00532 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDKL1Q00532 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 AC022616.7-201ENST00000525383 220 ntBASIC17.49■□□□□ 0.39
CDKL1Q00532 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CDKL1Q00532 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.49■□□□□ 0.39
CDKL1Q00532 GPR32P1-201ENST00000601788 811 ntBASIC17.49■□□□□ 0.39
CDKL1Q00532 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKL1Q00532 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.49■□□□□ 0.39
CDKL1Q00532 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDKL1Q00532 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL1Q00532 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDKL1Q00532 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.48■□□□□ 0.39
CDKL1Q00532 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKL1Q00532 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKL1Q00532 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDKL1Q00532 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDKL1Q00532 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.48■□□□□ 0.39
CDKL1Q00532 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKL1Q00532 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 TSPY12P-201ENST00000421279 868 ntBASIC17.48■□□□□ 0.39
CDKL1Q00532 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
CDKL1Q00532 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.48■□□□□ 0.39
CDKL1Q00532 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKL1Q00532 RN7SL850P-201ENST00000579959 291 ntBASIC17.48■□□□□ 0.39
CDKL1Q00532 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.48■□□□□ 0.39
CDKL1Q00532 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.48■□□□□ 0.39
CDKL1Q00532 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDKL1Q00532 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.48■□□□□ 0.39
CDKL1Q00532 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDKL1Q00532 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL1Q00532 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL1Q00532 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL1Q00532 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL1Q00532 AC018695.7-201ENST00000624587 2492 ntBASIC17.47■□□□□ 0.39
CDKL1Q00532 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CDKL1Q00532 NKILA-202ENST00000614771 2598 ntBASIC17.47■□□□□ 0.39
CDKL1Q00532 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms