Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.32■□□□□ 0.36
YBX1P67809 KRT18P1-202ENST00000452408 1331 ntBASIC17.32■□□□□ 0.36
YBX1P67809 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.32■□□□□ 0.36
YBX1P67809 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
YBX1P67809 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.32■□□□□ 0.36
YBX1P67809 KRT18P65-201ENST00000439811 1286 ntBASIC17.32■□□□□ 0.36
YBX1P67809 TPSP2-201ENST00000561760 610 ntBASIC17.32■□□□□ 0.36
YBX1P67809 AP005901.3-202ENST00000581653 237 ntBASIC17.32■□□□□ 0.36
YBX1P67809 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.32■□□□□ 0.36
YBX1P67809 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.32■□□□□ 0.36
YBX1P67809 AC009154.2-201ENST00000621177 724 ntBASIC17.32■□□□□ 0.36
YBX1P67809 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
YBX1P67809 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.32■□□□□ 0.36
YBX1P67809 SIRPAP1-201ENST00000448467 1770 ntBASIC17.32■□□□□ 0.36
YBX1P67809 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.32■□□□□ 0.36
YBX1P67809 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
YBX1P67809 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.32■□□□□ 0.36
YBX1P67809 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
YBX1P67809 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.32■□□□□ 0.36
YBX1P67809 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
YBX1P67809 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
YBX1P67809 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.31■□□□□ 0.36
YBX1P67809 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.31■□□□□ 0.36
YBX1P67809 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.31■□□□□ 0.36
YBX1P67809 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
YBX1P67809 MTCL1P1-201ENST00000446207 792 ntBASIC17.31■□□□□ 0.36
YBX1P67809 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.31■□□□□ 0.36
YBX1P67809 DUTP2-201ENST00000519164 463 ntBASIC17.31■□□□□ 0.36
YBX1P67809 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.31■□□□□ 0.36
YBX1P67809 AC090616.6-201ENST00000582640 721 ntBASIC17.31■□□□□ 0.36
YBX1P67809 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
YBX1P67809 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
YBX1P67809 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
YBX1P67809 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YBX1P67809 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
YBX1P67809 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.31■□□□□ 0.36
YBX1P67809 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 KRT8P47-201ENST00000604727 1398 ntBASIC17.3■□□□□ 0.36
YBX1P67809 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.3■□□□□ 0.36
YBX1P67809 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
YBX1P67809 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.3■□□□□ 0.36
YBX1P67809 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.3■□□□□ 0.36
YBX1P67809 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 ATP5G2P1-201ENST00000433580 426 ntBASIC17.3■□□□□ 0.36
YBX1P67809 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 GUSBP12-201ENST00000513727 720 ntBASIC17.3■□□□□ 0.36
YBX1P67809 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
YBX1P67809 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.3■□□□□ 0.36
YBX1P67809 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.3■□□□□ 0.36
YBX1P67809 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.3■□□□□ 0.36
YBX1P67809 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
YBX1P67809 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.3■□□□□ 0.36
YBX1P67809 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
YBX1P67809 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
YBX1P67809 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
YBX1P67809 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.3■□□□□ 0.36
YBX1P67809 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.3■□□□□ 0.36
YBX1P67809 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YBX1P67809 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.29■□□□□ 0.36
YBX1P67809 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
YBX1P67809 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.29■□□□□ 0.36
YBX1P67809 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.29■□□□□ 0.36
YBX1P67809 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms