Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S2P59780 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.28■□□□□ 0.04
AP3S2P59780 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.28■□□□□ 0.04
AP3S2P59780 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
AP3S2P59780 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S2P59780 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.28■□□□□ 0.04
AP3S2P59780 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
AP3S2P59780 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
AP3S2P59780 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.28■□□□□ 0.04
AP3S2P59780 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S2P59780 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP3S2P59780 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.28■□□□□ 0.04
AP3S2P59780 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.27■□□□□ 0.04
AP3S2P59780 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S2P59780 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S2P59780 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
AP3S2P59780 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S2P59780 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
AP3S2P59780 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.27■□□□□ 0.04
AP3S2P59780 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.27■□□□□ 0.04
AP3S2P59780 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S2P59780 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S2P59780 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S2P59780 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S2P59780 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S2P59780 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S2P59780 AC116407.2-201ENST00000613639 860 ntBASIC15.27■□□□□ 0.04
AP3S2P59780 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.27■□□□□ 0.04
AP3S2P59780 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP3S2P59780 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.27■□□□□ 0.04
AP3S2P59780 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.27■□□□□ 0.04
AP3S2P59780 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
AP3S2P59780 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.27■□□□□ 0.03
AP3S2P59780 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S2P59780 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S2P59780 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.27■□□□□ 0.03
AP3S2P59780 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S2P59780 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S2P59780 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S2P59780 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AP3S2P59780 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.26■□□□□ 0.03
AP3S2P59780 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
AP3S2P59780 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.26■□□□□ 0.03
AP3S2P59780 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
AP3S2P59780 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 PCDHA1-201ENST00000378133 2726 ntBASIC15.26■□□□□ 0.03
AP3S2P59780 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.26■□□□□ 0.03
AP3S2P59780 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.26■□□□□ 0.03
AP3S2P59780 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.26■□□□□ 0.03
AP3S2P59780 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.26■□□□□ 0.03
AP3S2P59780 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.26■□□□□ 0.03
AP3S2P59780 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 KRT18P5-201ENST00000436075 1291 ntBASIC15.26■□□□□ 0.03
AP3S2P59780 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.26■□□□□ 0.03
AP3S2P59780 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.26■□□□□ 0.03
AP3S2P59780 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.26■□□□□ 0.03
AP3S2P59780 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 AL445675.2-201ENST00000620291 557 ntBASIC15.26■□□□□ 0.03
AP3S2P59780 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.26■□□□□ 0.03
AP3S2P59780 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
AP3S2P59780 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S2P59780 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.26■□□□□ 0.03
AP3S2P59780 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
AP3S2P59780 AC016396.2-201ENST00000562575 1417 ntBASIC15.26■□□□□ 0.03
AP3S2P59780 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S2P59780 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S2P59780 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.25■□□□□ 0.03
AP3S2P59780 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.25■□□□□ 0.03
AP3S2P59780 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AP3S2P59780 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
AP3S2P59780 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S2P59780 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms