Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 AC106795.1-205ENST00000512851 1056 ntBASIC20.3■□□□□ 0.84
CHMP4BP1P59074 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 AC132008.2-207ENST00000454517 770 ntBASIC20.29■□□□□ 0.84
CHMP4BP1P59074 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 ANO7L1-203ENST00000602586 1720 ntBASIC20.29■□□□□ 0.84
CHMP4BP1P59074 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMP4BP1P59074 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 POM121L3P-201ENST00000419331 1163 ntBASIC20.28■□□□□ 0.84
CHMP4BP1P59074 AP001005.1-201ENST00000571755 1248 ntBASIC20.28■□□□□ 0.84
CHMP4BP1P59074 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 MYLKP1-201ENST00000509077 1580 ntBASIC20.28■□□□□ 0.84
CHMP4BP1P59074 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP4BP1P59074 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 KRT18P41-201ENST00000518924 1277 ntBASIC20.27■□□□□ 0.84
CHMP4BP1P59074 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 AC139713.2-201ENST00000641328 2723 ntBASIC20.27■□□□□ 0.84
CHMP4BP1P59074 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms