Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.42■□□□□ 0.7
NCKAP1LP55160 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.42■□□□□ 0.7
NCKAP1LP55160 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NCKAP1LP55160 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.42■□□□□ 0.7
NCKAP1LP55160 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.42■□□□□ 0.7
NCKAP1LP55160 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NCKAP1LP55160 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCKAP1LP55160 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCKAP1LP55160 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKAP1LP55160 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKAP1LP55160 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKAP1LP55160 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCKAP1LP55160 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKAP1LP55160 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCKAP1LP55160 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
NCKAP1LP55160 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKAP1LP55160 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NCKAP1LP55160 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.41■□□□□ 0.7
NCKAP1LP55160 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.41■□□□□ 0.7
NCKAP1LP55160 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.41■□□□□ 0.7
NCKAP1LP55160 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
NCKAP1LP55160 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.41■□□□□ 0.7
NCKAP1LP55160 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.41■□□□□ 0.7
NCKAP1LP55160 UNC93B7-201ENST00000509439 705 ntBASIC19.41■□□□□ 0.7
NCKAP1LP55160 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.41■□□□□ 0.7
NCKAP1LP55160 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.41■□□□□ 0.7
NCKAP1LP55160 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
NCKAP1LP55160 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKAP1LP55160 AL353593.2-201ENST00000602529 1483 ntBASIC19.41■□□□□ 0.7
NCKAP1LP55160 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 HLA-J-201ENST00000462773 1622 ntBASIC19.4■□□□□ 0.7
NCKAP1LP55160 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 AC132008.2-207ENST00000454517 770 ntBASIC19.4■□□□□ 0.7
NCKAP1LP55160 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 IFNL4P1-201ENST00000607083 540 ntBASIC19.4■□□□□ 0.7
NCKAP1LP55160 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.4■□□□□ 0.7
NCKAP1LP55160 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKAP1LP55160 AC133963.1-201ENST00000504166 1679 ntBASIC19.4■□□□□ 0.7
NCKAP1LP55160 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
NCKAP1LP55160 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NCKAP1LP55160 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
NCKAP1LP55160 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.39■□□□□ 0.69
NCKAP1LP55160 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 AKR1C7P-201ENST00000305623 895 ntBASIC19.39■□□□□ 0.69
NCKAP1LP55160 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 AL450487.1-201ENST00000426799 995 ntBASIC19.39■□□□□ 0.69
NCKAP1LP55160 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.39■□□□□ 0.69
NCKAP1LP55160 ABCD1P5-201ENST00000445663 754 ntBASIC19.39■□□□□ 0.69
NCKAP1LP55160 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.39■□□□□ 0.69
NCKAP1LP55160 KRT126P-201ENST00000549467 1181 ntBASIC19.39■□□□□ 0.69
NCKAP1LP55160 AC109462.3-201ENST00000573934 613 ntBASIC19.39■□□□□ 0.69
NCKAP1LP55160 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.39■□□□□ 0.69
NCKAP1LP55160 AP000867.4-201ENST00000641616 219 ntBASIC19.39■□□□□ 0.69
NCKAP1LP55160 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NCKAP1LP55160 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NCKAP1LP55160 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NCKAP1LP55160 KRT8P10-201ENST00000450021 1447 ntBASIC19.39■□□□□ 0.69
NCKAP1LP55160 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NCKAP1LP55160 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms