Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.5■□□□□ 0.55
EPHB3P54753 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.5■□□□□ 0.55
EPHB3P54753 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.5■□□□□ 0.55
EPHB3P54753 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.5■□□□□ 0.55
EPHB3P54753 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
EPHB3P54753 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 AC005593.1-201ENST00000624894 515 ntBASIC18.5■□□□□ 0.55
EPHB3P54753 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.5■□□□□ 0.55
EPHB3P54753 REXO1L9P-201ENST00000604264 2108 ntBASIC18.5■□□□□ 0.55
EPHB3P54753 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
EPHB3P54753 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
EPHB3P54753 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
EPHB3P54753 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
EPHB3P54753 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.49■□□□□ 0.55
EPHB3P54753 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.49■□□□□ 0.55
EPHB3P54753 AC132938.5-201ENST00000624980 1813 ntBASIC18.49■□□□□ 0.55
EPHB3P54753 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
EPHB3P54753 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 AC003669.1-201ENST00000334569 611 ntBASIC18.49■□□□□ 0.55
EPHB3P54753 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
EPHB3P54753 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.49■□□□□ 0.55
EPHB3P54753 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.49■□□□□ 0.55
EPHB3P54753 BX842568.4-201ENST00000421222 227 ntBASIC18.49■□□□□ 0.55
EPHB3P54753 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.49■□□□□ 0.55
EPHB3P54753 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.49■□□□□ 0.55
EPHB3P54753 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.49■□□□□ 0.55
EPHB3P54753 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
EPHB3P54753 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
EPHB3P54753 AC109462.3-201ENST00000573934 613 ntBASIC18.49■□□□□ 0.55
EPHB3P54753 AC139530.3-201ENST00000620344 690 ntBASIC18.49■□□□□ 0.55
EPHB3P54753 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.49■□□□□ 0.55
EPHB3P54753 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.49■□□□□ 0.55
EPHB3P54753 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.49■□□□□ 0.55
EPHB3P54753 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.49■□□□□ 0.55
EPHB3P54753 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 AC009949.1-201ENST00000623048 1830 ntBASIC18.49■□□□□ 0.55
EPHB3P54753 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.49■□□□□ 0.55
EPHB3P54753 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EPHB3P54753 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
EPHB3P54753 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.48■□□□□ 0.55
EPHB3P54753 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.48■□□□□ 0.55
EPHB3P54753 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.48■□□□□ 0.55
EPHB3P54753 KRT18P27-201ENST00000427733 1299 ntBASIC18.48■□□□□ 0.55
EPHB3P54753 SIGLEC30P-201ENST00000455569 941 ntBASIC18.48■□□□□ 0.55
EPHB3P54753 AC136632.2-201ENST00000512891 861 ntBASIC18.48■□□□□ 0.55
EPHB3P54753 IGHV3-52-201ENST00000519770 353 ntBASIC18.48■□□□□ 0.55
EPHB3P54753 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.48■□□□□ 0.55
EPHB3P54753 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.48■□□□□ 0.55
EPHB3P54753 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.48■□□□□ 0.55
EPHB3P54753 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
EPHB3P54753 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.48■□□□□ 0.55
EPHB3P54753 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.48■□□□□ 0.55
EPHB3P54753 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
EPHB3P54753 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.48■□□□□ 0.55
EPHB3P54753 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
EPHB3P54753 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.48■□□□□ 0.55
EPHB3P54753 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.48■□□□□ 0.55
EPHB3P54753 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
EPHB3P54753 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
EPHB3P54753 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.48■□□□□ 0.55
EPHB3P54753 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
EPHB3P54753 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EPHB3P54753 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
EPHB3P54753 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms