Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.51■□□□□ 0.39
LIMK1P53667 PRSS29P-201ENST00000440800 595 ntBASIC17.51■□□□□ 0.39
LIMK1P53667 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.51■□□□□ 0.39
LIMK1P53667 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.51■□□□□ 0.39
LIMK1P53667 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.51■□□□□ 0.39
LIMK1P53667 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.51■□□□□ 0.39
LIMK1P53667 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.51■□□□□ 0.39
LIMK1P53667 AC092865.6-201ENST00000642101 219 ntBASIC17.51■□□□□ 0.39
LIMK1P53667 AC068880.1-201ENST00000507289 2297 ntBASIC17.51■□□□□ 0.39
LIMK1P53667 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.51■□□□□ 0.39
LIMK1P53667 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK1P53667 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LIMK1P53667 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.51■□□□□ 0.39
LIMK1P53667 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK1P53667 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK1P53667 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK1P53667 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK1P53667 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK1P53667 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.51■□□□□ 0.39
LIMK1P53667 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.5■□□□□ 0.39
LIMK1P53667 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 CRYGEP-201ENST00000412192 528 ntBASIC17.5■□□□□ 0.39
LIMK1P53667 CEND1P1-201ENST00000451006 455 ntBASIC17.5■□□□□ 0.39
LIMK1P53667 PRYP5-201ENST00000451909 266 ntBASIC17.5■□□□□ 0.39
LIMK1P53667 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.5■□□□□ 0.39
LIMK1P53667 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.5■□□□□ 0.39
LIMK1P53667 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.5■□□□□ 0.39
LIMK1P53667 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.5■□□□□ 0.39
LIMK1P53667 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 AC027612.4-201ENST00000605371 583 ntBASIC17.5■□□□□ 0.39
LIMK1P53667 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.5■□□□□ 0.39
LIMK1P53667 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.5■□□□□ 0.39
LIMK1P53667 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LIMK1P53667 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.5■□□□□ 0.39
LIMK1P53667 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK1P53667 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK1P53667 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LIMK1P53667 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LIMK1P53667 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.49■□□□□ 0.39
LIMK1P53667 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.49■□□□□ 0.39
LIMK1P53667 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK1P53667 TSEN15P1-201ENST00000423257 515 ntBASIC17.49■□□□□ 0.39
LIMK1P53667 PAWRP1-201ENST00000451083 565 ntBASIC17.49■□□□□ 0.39
LIMK1P53667 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LIMK1P53667 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.49■□□□□ 0.39
LIMK1P53667 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK1P53667 AC073592.4-201ENST00000623827 446 ntBASIC17.49■□□□□ 0.39
LIMK1P53667 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.49■□□□□ 0.39
LIMK1P53667 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LIMK1P53667 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK1P53667 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
LIMK1P53667 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LIMK1P53667 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK1P53667 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LIMK1P53667 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LIMK1P53667 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.48■□□□□ 0.39
LIMK1P53667 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms