Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL596442.2-201ENST00000610240 980 ntBASIC21.95■■□□□ 1.1
NUP98P52948 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NUP98P52948 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.95■■□□□ 1.1
NUP98P52948 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.95■■□□□ 1.1
NUP98P52948 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.95■■□□□ 1.1
NUP98P52948 AL138781.2-201ENST00000617896 1843 ntBASIC21.95■■□□□ 1.1
NUP98P52948 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
NUP98P52948 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.95■■□□□ 1.1
NUP98P52948 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.94■■□□□ 1.1
NUP98P52948 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUP98P52948 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NUP98P52948 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
NUP98P52948 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.94■■□□□ 1.1
NUP98P52948 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NUP98P52948 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NUP98P52948 PRSS29P-201ENST00000440800 595 ntBASIC21.94■■□□□ 1.1
NUP98P52948 VN2R19P-201ENST00000442399 1052 ntBASIC21.94■■□□□ 1.1
NUP98P52948 AP000344.2-201ENST00000512987 629 ntBASIC21.94■■□□□ 1.1
NUP98P52948 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NUP98P52948 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.94■■□□□ 1.1
NUP98P52948 AC068137.2-201ENST00000605408 478 ntBASIC21.94■■□□□ 1.1
NUP98P52948 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.94■■□□□ 1.1
NUP98P52948 AC004877.2-201ENST00000623941 599 ntBASIC21.94■■□□□ 1.1
NUP98P52948 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUP98P52948 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUP98P52948 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.94■■□□□ 1.1
NUP98P52948 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUP98P52948 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUP98P52948 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
NUP98P52948 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUP98P52948 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUP98P52948 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
NUP98P52948 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.94■■□□□ 1.1
NUP98P52948 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
NUP98P52948 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
NUP98P52948 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.94■■□□□ 1.1
NUP98P52948 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NUP98P52948 MYCLP1-201ENST00000372451 1075 ntBASIC21.94■■□□□ 1.1
NUP98P52948 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.94■■□□□ 1.1
NUP98P52948 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.94■■□□□ 1.1
NUP98P52948 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.94■■□□□ 1.1
NUP98P52948 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.94■■□□□ 1.1
NUP98P52948 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.94■■□□□ 1.1
NUP98P52948 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUP98P52948 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUP98P52948 FLJ13224-201ENST00000313737 1514 ntBASIC21.93■■□□□ 1.1
NUP98P52948 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUP98P52948 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.93■■□□□ 1.1
NUP98P52948 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
NUP98P52948 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUP98P52948 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NUP98P52948 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.93■■□□□ 1.1
NUP98P52948 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.93■■□□□ 1.1
NUP98P52948 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.93■■□□□ 1.1
NUP98P52948 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.93■■□□□ 1.1
NUP98P52948 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.93■■□□□ 1.1
NUP98P52948 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.93■■□□□ 1.1
NUP98P52948 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
NUP98P52948 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NUP98P52948 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
NUP98P52948 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
NUP98P52948 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP98P52948 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NUP98P52948 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NUP98P52948 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.92■■□□□ 1.1
NUP98P52948 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.92■■□□□ 1.1
NUP98P52948 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.92■■□□□ 1.1
NUP98P52948 AC090164.3-201ENST00000610780 2143 ntBASIC21.92■■□□□ 1.1
NUP98P52948 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.92■■□□□ 1.1
NUP98P52948 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP98P52948 KRT18P55-202ENST00000578578 1546 ntBASIC21.92■■□□□ 1.1
NUP98P52948 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP98P52948 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP98P52948 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP98P52948 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
NUP98P52948 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP98P52948 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP98P52948 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.92■■□□□ 1.1
NUP98P52948 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP98P52948 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP98P52948 LINC00982-205ENST00000420957 435 ntBASIC21.92■■□□□ 1.1
NUP98P52948 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.92■■□□□ 1.1
NUP98P52948 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.92■■□□□ 1.1
NUP98P52948 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.91■■□□□ 1.1
NUP98P52948 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP98P52948 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NUP98P52948 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.91■■□□□ 1.1
NUP98P52948 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP98P52948 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
NUP98P52948 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP98P52948 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP98P52948 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
NUP98P52948 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP98P52948 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
NUP98P52948 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NUP98P52948 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP98P52948 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
NUP98P52948 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUP98P52948 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUP98P52948 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms